PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100221470052
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 311aa    MW: 33977.1 Da    PI: 7.4413
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100221470052genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH474.5e-154594255
                                  HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                                  r +h+  E+rRR++iN++f+ Lrel+P++    ++K + a+ L ++++Y++ Lq
  Ote100221470052|100221470052 45 RSKHSVTEQRRRSKINERFQILRELIPHS----DQKRDTASFLLEVIQYVQFLQ 94
                                  889*************************9....8*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.83E-1841115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.6E-2242115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.9294393IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.91E-154598No hitNo description
PfamPF000102.2E-124594IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-114999IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MKSGKGHXXX XXXXXXXFGA KKDATSSANN SKADGKSSDK ANAVRSKHSV TEQRRRSKIN  60
ERFQILRELI PHSDQKRDTA SFLLEVIQYV QFLQEKVQKY EGSYQPWNSE PTKLMPWRNS  120
HWRVQNFVGQ KNGSGPGSTF PGRFDENNGA VESDHSRDGP SRPLNPHTEL PNKSMSMPFP  180
IPVSMANDGC FSHTLHGLPT SDAQSAECPI TVDGMNHQDD LTIEGGTISV SSVYSEGLLS  240
ALTQALESAS IDLSQASISV QINLGKRANI GGAPENAIAK DHVIAAPSNN QAYHDGASSE  300
DLDLAHKRPK T
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011102227.11e-138PREDICTED: transcription factor BIM2-like
SwissprotQ9CAA43e-93BIM2_ARATH; Transcription factor BIM2
TrEMBLA0A0H3Y8Y91e-167A0A0H3Y8Y9_SALMI; Basic helix-loop-helix transcription factor
STRINGVIT_01s0010g00540.t011e-117(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44262337